Search results for "light-sheet microscopy"

showing 5 items of 5 documents

A survey of clearing techniques for 3D imaging of tissues with special reference to connective tissue

2016

AbstractFor 3-dimensional (3D) imaging of a tissue, 3 methodological steps are essential and their successful application depends on specific characteristics of the type of tissue. The steps are 1° clearing of the opaque tissue to render it transparent for microscopy, 2° fluorescence labeling of the tissues and 3° 3D imaging. In the past decades, new methodologies were introduced for the clearing steps with their specific advantages and disadvantages. Most clearing techniques have been applied to the central nervous system and other organs that contain relatively low amounts of connective tissue including extracellular matrix. However, tissues that contain large amounts of extracellular mat…

0301 basic medicinePathologymedicine.medical_specialtyTissue FixationHistologyClinical BiochemistryGingiva3D histochemistryConnective tissueBenzoatesSpecimen HandlingExtracellular matrixFixatives03 medical and health sciencesImaging Three-DimensionalDermis3D imagingmedicineClearingAnimalsHumansSkinFluorescent DyesMicroscopy ConfocalStaining and LabelingLight-sheet microscopyHistocytochemistryChemistryPhenyl EthersPhenyl EthersExtracellular matrixCell Biology030104 developmental biologymedicine.anatomical_structureConnective TissueLight sheet fluorescence microscopyClearingBenzyl AlcoholProgress in Histochemistry and Cytochemistry
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Fast Inertia-Free Volumetric Light-Sheet Microscope

2017

Fast noninvasive three-dimensional (3D) imag-ing is crucial for quantitatively studying highly dynamic events ranging from flow cytometry to developmental biology. Light-sheet microscopy has emerged as the tool-of-choice for 3D characterization of rapidly evolving systems. However, to obtain a 3D image, either the sample or parts of the microscope are moved, limiting the acquisition speed. Here, we propose a novel inertia-free light-sheet-based scheme for volumetric imaging at high temporal resolution. Our approach comprises a novel combination of an acousto-optic scanner to produce tailored illumination and an acoustic-optofluidic lens, placed in the detection path to provide extended dept…

0301 basic medicineScanneracouto-optic devicesMaterials scienceMicroscopethree-dimensional microscopy01 natural sciencesAcouto-optic devices flow cytometry light-sheet microscopy three-dimensional microscopy Electronic Optical and Magnetic Materials Biotechnology Atomic and Molecular Physics and Optics Electrical and Electronic Engineeringlaw.invention010309 optics03 medical and health sciencesOpticslawAtomic and Molecular Physics0103 physical sciencesMicroscopyElectronicOptical and Magnetic MaterialsElectrical and Electronic Engineeringbusiness.industryflow cytometryRangingFrame rateAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsCharacterization (materials science)Lens (optics)acouto-optic devices; flow cytometry; light-sheet microscopy; three-dimensional microscopy; Electronic Optical and Magnetic Materials; Biotechnology; Atomic and Molecular Physics and Optics; Electrical and Electronic Engineering030104 developmental biologyLight sheet fluorescence microscopyand Opticsbusinesslight-sheet microscopyBiotechnologyACS Photonics
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Advanced fluorescence microscopy for in vivo imaging of neuronal activity

2019

Brain function emerges from the coordinated activity, over time, of large neuronal populations placed in different brain regions. Understanding the relationships of these specific areas and disentangling the contributions of individual neurons to overall function remain central goals for neuroscience. In this scenario, fluorescence microscopy has been proved as the tool of choice for in vivo recording of brain activity. Optical advances combined with genetically encoded indicators allow a large flexibility in terms of spatiotemporal resolution and field of view while keeping invasiveness in living animals to a minimum. Here we describe the latest advancements in the field of linear and nonl…

Flexibility (engineering)0303 health sciencesBrain activity and meditationComputer science01 natural sciencesAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic Materials010309 optics03 medical and health scienceslight-sheet microscopy; field-of-view; cellular-resolution; adaptive optics; multiphoton microscopy; GRID CELLS; HIGH-SPEED; LONG-TERM; 2-PHOTON; DEEPLight sheet fluorescence microscopy0103 physical sciencesFluorescence microscopePremovement neuronal activityIn vivo microscopyOptics In vivo imaging MicroscopyNeurosciencePreclinical imagingBrain function030304 developmental biologyOptica
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Dual-beam confocal light-sheet microscopy via flexible acousto-optic deflector

2019

Confocal detection in digital scanned laser light-sheet fluorescence microscopy (DSLM) has been established as a gold standard method to improve image quality. The selective line detection of a complementary metal-oxide-semiconductor camera (CMOS) working in rolling shutter mode allows the rejection of out-of-focus and scattered light, thus reducing background signal during image formation. Most modern CMOS have two rolling shutters, but usually only a single illuminating beam is used, halving the maximum obtainable frame rate. We report on the capability to recover the full image acquisition rate via dual confocal DSLM by using an acoustooptic deflector. Such a simple solution enables us t…

Image formationPaperMaterials scienceImage qualityConfocalBiomedical Engineeringacousto-optic deflector; confocal detection; digital scanned laser light-sheet fluorescence microscopy; high contrast; high-throughput microscopy; light-sheet microscopy; mouse brain; zebrafish brainconfocal detection01 natural scienceslaw.invention010309 opticsBiomaterialsMiceacousto-optic deflectorOpticslaw0103 physical sciencesMicroscopyImage Processing Computer-AssistedAnimalsZebrafishhigh-throughput microscopyconfocal light-sheet microscopyMicroscopyMicroscopy Confocalbusiness.industryhigh contrastRolling shutterBrainEquipment DesignLaserFrame ratezebrafish brainAtomic and Molecular Physics and OpticsElectronic Optical and Magnetic MaterialsHigh-Throughput Screening AssaysMice Inbred C57BLdigital scanned laser light-sheet fluorescence microscopyMicroscopy FluorescenceLight sheet fluorescence microscopyLarvamouse brainbusinesslight-sheet microscopyJournal of Biomedical Optics
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Removing striping artifacts in light-sheet fluorescence microscopy: a review

2022

Abstract In recent years, light-sheet fluorescence microscopy (LSFM) has found a broad application for imaging of diverse biological samples, ranging from sub-cellular structures to whole animals, both in-vivo and ex-vivo, owing to its many advantages relative to point-scanning methods. By providing the selective illumination of sample single planes, LSFM achieves an intrinsic optical sectioning and direct 2D image acquisition, with low out-of-focus fluorescence background, sample photo-damage and photo-bleaching. On the other hand, such an illumination scheme is prone to light absorption or scattering effects, which lead to uneven illumination and striping artifacts in the images, oriented…

Materials scienceOptical sectioningBiophysicsBrain imaging01 natural sciences010309 optics03 medical and health sciencesOptics0103 physical sciencesFluorescence microscopeAnimalsMolecular Biology030304 developmental biology0303 health sciencesLight-sheet microscopyScatteringbusiness.industryRangingSample (graphics)FluorescenceMicroscopy FluorescenceLight sheet fluorescence microscopy3D microscopyStripingData striping3D microscopy; Brain imaging; Light-sheet microscopy; StripingArtifactsbusinessProgress in Biophysics and Molecular Biology
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